Publications
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Broom BM, Rinsurongkawong W, Pusztai L, Do K-A (2008). Building networks with microarray data. To appear in
Statistical Methods in Molecular Biology .
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Broom BM, Do K-A , Subramanian D (2008). Model averaging for structure learning in Bayesian networks: an experimental study.
Submitted to IEEE Transactions on Pattern Analysis and Machine Intelligence.
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Zhang S., Mueller P, Do K-A (2008). A Bayesian semiprametric longitudinal-cure model with pseudo priors. Submitted to Biometrics .
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Jeong J, Vannucci M, Do K-A , Broom BM, Kim S, Sha N, Tadesse M, Tan
K, Pusztai L (2008). Gene selection for the identification of biomarkers in high
-throughput data. In Bayesian Modeling in Bioinformatics , Dey DK, Ghosh S,
Mallick B (Eds), Chapman & Hall / CRC press.
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McDonnell T, Chari N, Cho-Vega JH, Troncoso P, Wang X, Bueso-Ramos CE, Bri
sbay S, Lopez R, Prendergast G, Logothetis C, Do K-A . (2008) Biomarker Expression Patterns that Correlate with High Grade Features in Treatment Naive, Organ-Confined Prostate Cancer. BMC Medical Genomics , Jan 31, online publication.
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Tsavachidou D, McDonnell T, Wen S, Wang X, Vakar-Lopez F, Pisters L, Petta
way C, Wood C, Do, K-A , Thall P, Stephens L, Taylor R, Menter D, Troncoso
P, Lippman S, Logothetis CJ (2008). Cell type and intervention-specific tissue
effects of Selenium and vitamin E in prostate cancer. To appear in JNCI .
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Millikan RE, Wen S, Pagliaro LC, Brown MA, Moomey B, Do, K-A , Logothetis CJ (2008). Phase III trial of androgen ablation with or without 3 cycles
of systemic chemotherapy for advanced prostate cancer. To appear in JCO .
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Tam CS, Wierda WG, O'Brien S, Lerner S, Wen S, Do, K-A , Schlette E,
Kamtarjian H, Keating MJ (2008). Chemoimmunotherapy with Fludarabine, Cyclophosp
hamide & Rituximab as Initial Therapy of Chronic Lymphocytic Leukemia. Submitt
ed to New England Journal of Medicine .
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Tam CS, O'Brien S, Wierda W, Kantarjian H, Wen S, Do, K-A , Thomas D
A, Cortes J, Lerner S, Keating MJ (2008). Long-term results of Fludarabine, Cyclophosphamide & Rituximab regimen as Initial Therapy of Chronic Lymphocytic Leukemia. Submitted to Blood .
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Kuwai T, Nakamura T, Sasaki T, Kitadai Y, Kim J-S, Langley RR, Fan D, Wang
X, Do K-A , Kim S-J, Fidler IJ (2008). Targeting the EGFR, VEGFR, PDGFR o
n colon cancer cells and stromal cells is required for therapy, Clinical and Experimental Metastasis , 25(4): 477--489.
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Lin S-H, Lee Y-C, Choueiri MB, Wen S, Matthew P, Ye X, Do K-A , Kim
J, Tu S-M, Yu-Lee L-Y, Logothetis CJ. Soluble forms of ErbB3 in bone marrow and
plasma of men with prostate cancer (2008). Clinical Cancer Research ,
16(12):2615--2622.
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Ji Y, Yin G, Tsui K-W, Kolonin MG, Sun J, Arap W, Pasqualini R, Do K-A (2007). Bayesian mixture models for complex high-dimensional count data in phage display experiments. Journal of the Royal Statistical Society, Series C - Applied Statistics , 56(2):1-14.
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Do K-A , McLachlan GJ, Bean R, Wen S (2007). Gene shaving versus mixture models for the clustering of microarray gene expression data. Cancer Informatics , 2:25-43.
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Broom BM, Do K-A (2007). Statistical methods for biomarker discovery using mass spectrometry. Statistical Methodology in the Biomedical Sciences: State of the Art and Future Directions , edited by Atanu Biswas, Sujay Datta, Jason Fine, Mark Segal, Wiley Publishers.
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Brewster A, Do K-A , Thompson PA, Hahn KM, Sahin A, Cao Y, Stewart M, Murray J, Hortobagyi GN, Bondy M (2007). The relationship between epidemiological risk factors and breast cancer recurrence. JCO, 25(28):4438--4444.
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Cho-Vega JH, Tsavachidis S, Do K-A , Medeiros LJ, Troncoso P, Nakagama J, McDonnell TJ. Dicarbonyl/L-Xylulose Reductase: A potential biomarker identified by laser capture microdissection - micro serial analysis of gene expression of human prostate adenocarcinoma (2007). Cancer Epidemiology, Biomarkers & Prevention , 16(12):2615-2622.
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Lin S-H, Lee Y-C, Choueiri MB, Wen S, Matthew P, Ye X, Do K-A , Kim J, Tu S-M, Yu-Lee L-Y, Logothetis CJ. Soluble forms of ErbB3 in bone marrow and plasma of men with prostate cancer (2007). Clinical Cancer Research:2615-2622.
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Tsimberidou A-M, Wen S, O'Brien S, McLaughlin P, Wierda WG, Ferrajoli A, Faderl S, Manning J, Lerner S, Mai C, Rodriguez AM, Hess M, Do K-A , Freireich EJ, Kantarjan H, Medeiros LJ, Keating MJ (2007). Assessment of chronic lymphocytic leukemia and small lymphocytic lymphoma by absolute lymphocyte counts in 2126 patients: 20 years of experience at M.D. Anderson Cancer Center. JCO , 25(29):4648--4656.
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Wierda WG, O'Brien S, Wang X, Faderl S, Ferrajoli A, Do K-A , Cortes J, Thomas D, Garcia-Manero G, Koller C, Beran M, Giles F, Ravandi F, Lerner S, Kantarjan H, Keating M (2007). Prognostic nomogram for overall survival in previously untreated patients with chronic lymphocytic leukemia. Blood , 109:4679--4685.
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Guindani M, Do K-A , Muller P, Morris J. (2006). Bayesian mixture models for gene expression and protein profiles. In Bayesian Inference for Gene Expression and Proteomics , Cambridge University Press, pp. 238-253.
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Wang J, Do K-A , Wen S, Tsavachidis S, McDonnell TJ, Logothetis C, Coombes KR (2006). Merging microaray data, robust feature selection, and predicting prognosis in prostate cancer. Cancer Informatics , 2:87-97.
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Albitar M, Johnson MM, Do K-A , Day A, Jilani I, Pierce S, Estey E, Kantarjan H, Keating M, Verstovsek S, O'Brien S, Giles FJ (2007). Levels of soluble HLA-I and beta2M in patients with acute myloid leukemia and advanced myelodysplastic syndrome: association with clinical behavior and outcome of induction therapy. Leukemia , 21(3):480-488.
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Efstathiou E, Troncoso P, Wen S, Do K-A , Chansangavej C, Pettaway CA, McDonnell TJ, Logothetis CJ (2007). Initial modulation
of the tumor microenvironment accounts for Thalidomide efficacy in prostate cancer. Clinical Cancer Research , 13(4):1224-1231.
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Wu X, Gu J, Dong Q, Huang M, Do K-A , Hong WK, Spitz MR (2006). Joint efect of mutagen sensitivity and insulin-like growth factors in predicting the risk of developing secondary primary tumors and tumor recurrence in patients with head and neck cancer. ClinCancer Res , 12(23):7194-7201.
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Esmaeli B, Amin S, Valero V, Adinin R, Arbuckle R, Banay R, Do K-A , Rivera E (2006). Prospective study of incidence and severity of epiphora and canalicular stenosis in patients with metastatic breast cancer receiving Docetaxel. JCO 24(22): 3619-3622.
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Mao S, Daliani D, Wang X, Do K-A , Thall PF, Perez CA, Brown MA, Logothetis CJ, Kim J (2007). Randomized, double-blind, placeb
o-controlled trial of IM862 in patients with relapsed prostate cancer: a platform for new drug screening. To appear, Clinical Cancer Research .
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Kundra V, Ng CS, Ma J, Bankson JA, Price RE, Cody DD, K-A Do , Sikes CR, Erwin WD, Han L, Navone NM (2007). In vivo imaging of prostate cancer involving bone in a mouse model. Prostate} 67(1):50-60.
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Busby JE, Kim SJ, Yazici S, Nakamura T, Kim JS, He J, Maya M, Wang X, Do K-A , Fan D, Fidler IJ (2006). Therapy of multidrug
resistant human prostate tumors in the prostate of nude mice by simultaneous targeting of the epidermal growth factor receptor and vascular endothelial growth factor receptor on tumor-associated endothelial cells. The Prostate , 66:1788-1798.
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Kim SJ, Uehara H, Yazici S, Busby JE, Nakamura T, He J, Maya M, Logothetis C, Mathew P, Wang X, Do K-A , Fan D, Fidler IJ (2006). Targeting platelet-derived growth factor receptor on endothelial cells of multi-drug resistant prostate cancer. JNCI , 98(11):783-793.
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Wierda WG, O'Brien S, Faderl S, Ferrajoli A, Wang X, Do K-A , Garcia-Manero G, Thomas D, Cortes J, Ravandi-Kashani F, Giles F, Lerner S, Kantarjian H, Keating M (2006). A retrospective comparison of three sequential groups of relapsed/refractory patients with ch
ronic lymphocytic leukemia treated with Fludarabine-based regimens. Cancer , 106}(2):337-345.
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Tannir N, Jonasch E, Pagliaro LC, Matthew P, Siefker-Radtke A, Rhines L, Lin P, Tibbs R, Do K-A , Lin SH, Tu S-M (2006). A pilot trial of bone-targeted therapy with zoledronate, thalidomide, and interferon-gamma for metastatic renal cell carcinoma. Cancer, 107(3):497-505.
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Spiess PE, Lee AK, Leibovici D, Wang X, Do K-A , Pisters LL (2006). Pre-salvage PSA and PSA doubling time as predictors of biochemical failure in patients treated with salvage cryotherapy. Cancer , 107}(2):275-280.
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Tsimberidou A-M, O'Brien S, Khouri I, Gile FJ, Kantarjian HM, Champlin R, Wen S, Do K-A , Smith SC, Lerner S, Freireich EJ, Keating MJ (2006). Clinical outcomes and prosnostic factors in patients with Richter's syndrome treated with chemotherapy or chemoimmunothe
rapy with or without stem cell transplantation. Journal of Clinical Oncology , 24:2343-2351.
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Tsimberidou AM, Catovsky D, Schlette E, O'Brien S, Wierda WG, Kantarjian H, Garcia-Manero G, Wen S, Do K-A , Lerner S, Keating
MJ (2006). Outcomes in patients with splenic marginal zone lymphoma and marginal zone lymphoma treated with Rituximab with or without chemotherapy or chemotherapy alone. Cancer , 107:125-135.
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Kolonin MG, Bover L, Sun J, Do K-A , Zurita AJ, Lahdenranta J, Cardo-Vila M, Giordano RJ, Jaalouk DE, Ozawa MG, Moya CA, Souza
GR, Staquicini FI, Kunyiasy A, Scudiero DA, Holbeck SL, Sausville EA, Arap W, Pasqualini R (2006). Ligand-directed surface profiling of human cancer cells with combinatorial peptide libraries. Cancer Research , 66:34-40.
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Kolonin MG, Sun J, Do K-A , Vidal CI, Ji Y, Baggerly KA, Arap W, Pasqualini R (2006). Synchronous selection of homing peptides for multiple tissues by in vivo display. Federation of the American Society for Experimental Biology Journal , 20}(2):979-981.
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Spiess PE, Kassouf W, Brown G, Highshaw R, Wang X, Do K-A , Kamat AM, Czerniak B, Dinney CPN, Grossman HB (2006). Immediate versus staged urethrectomy in patients at high-risk of urethral recurrence: Is there a benefit to either approach? Urology , 67:466-471.
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Soliman AS, Wang X, Stanley J-D, El-Ghawalby N, Bondy ML, Ezzat F, Soultan A, Abdel-Wahab M, Fathy O, Ebidi G, Abdel-Karim N, Do K-A, Levin B, Hamilton SR, Abruzzese JL (2006). Geographical clustering of pancreatic cancers in the Northeast Nile Delta region of Egypt. Archives of Environmental Contamination and Toxicology , 51:142-148.
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Rosser CJ, Kamat AM, Babaian RJ, Wang X, Do K-A , Naya Y, Hoover DC, Troncoso P, Sanches-Ortiz RF, Pisters LL (2006). Biochemical disease-free survival in men younger than 60 years with prostate cancer treated with radical prostatectomy. Urology , 67(4): 769-773.
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Rosser CJ, Kamat AM, Wang X, Do K-A , Sanchez-Ortiz RF, Kuban DA, Lee AK, Cheung R, Chichakli R, Pisters LL (2005). Is patien
t age a factor in the occurrence of prostate-specific antigen bounce phenomenon after external beam radiotherapy for prostate cancer?
Urology , 66(2):327-331.
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Faderl S, Do K-A , Johnson MM, Aguilar C, Thomas D, Dey A, Keating M, O'Brien S, Jilani I, Ferrajoli A, Giles FJ, Kantarjian H
M, Albitar M (2005). Angiogenic factors may have a different prognostic role in adult acute lymphoblastic leukemia (ALL). Blood , 106(13):4303-4307.
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Strom SS, Wang X, Pettaway CA, Yamamura Y, Do K-A, Troncoso P, Babaian RJ, Logothetis CJ (2005).
Obesity, weight gain, and risk of biochemical filure among prostate cancer patients following prostatectomy.
Clinical Cancer Research , 11:6889-6894.
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Do, K-A, Mueller P, Tang F. A nonparametric Bayesian mixture model for gene expression (2005).
Journal of the Royal Statistical Society, Series C - Applied Statistics , 54(3):1-18.
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Leibovici D, Kamat AM, Do K-A , Pettaway CA, Ng CS, Evans RB, Rodrigu
ez-Bigas M, Skibber J, Wang X, Pisters LL (2005). Transrectal ultrasound versus
magnetic resonance imaging for detection of rectal wall invasion by prostate can
cer. Prostate , 62(1): 101-104.
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Cho JH, Troncoso P, Do K-A , Rago C, Wang X, Tsavachidis S, Medeiros LJ,
Spurgers K, Logothetis C, McDonnell TJ. Combined laser capture microdissection
and micro-serial analysis of gene expression (LCM-microSAGE) from human
tissue samples (2005). Modern Pathology , 18(4):577-584.
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Wierda WG, O'Brien S, Wen S, Faderl S, Guillermo G-M, Thomas D, Do K-A ,
Cortes J, Koller C, Beran M, Ferrajoli A, Giles FJ, Lerner S, Albitar M,
Kantarjian H, Keating M (2005). Chemoimmunotherapy with fludarabine,
cyclophosphamide and rituximab for relapsed and refractory chronic lymphocytic
leukemia. Journal of Clinical Oncology, 23(18):9 pages.
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Do, K-A , Johnson MM, Lee JJ, Wu XF, Dong Q, Hong WK, Khuri FR, Spitz MR (2005).
A comprehensive study of the longitudinal effects of smoking relative to development of
secondary primary tumors in patients with upper aerodigestive tract cancers (39 pages).
To appear in Focus on Smoking and Health Research , Nova Science.
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Do, K-A , Johnson MM, Lee JJ, Wu XF, Dong Q, Hong WK, Khuri FR, Spitz MR (2004).
A longitudinal study of smoking patterns relative to the development of
smoking-related secondary primary tumors in patients with upper aerodigestive tract cancers.
Cancer , 101(12):2837-2842.
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Assikis VJ, Do K-A , Wen S, Wang X, Cho-Vega JH, Brisbay S, Lopez R,
Logothetis C, Troncoso P, Papandreou CN, McDonnell TJ (2004). Clinical and bioma
rker correlates of androgen-independent, locally aggressive prostate cancer wit
h limited metastatic potential. Clinical Cancer Research , 10(20): 6770--6778.
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McLachlan GJ, Do, K-A, Ambroise C. Analysing microarray gene expression data (2004). Wiley, NY.
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Giles FJ, Vose JM, Do K-A , Johnson MM, Manshouri T, Bociek G, Bierman PJ,
O'brien SM, Kantarjian HM, Armitage JO, Albitar M (2004). Clinical relevance of circulating
angiogenic factors in patients with Non-Hodgkin's lymphoma or Hodgkin's lymphoma.
Leukemia Research , 28(6):596-604.
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Wu X, Zhao H, Do K-A , Johnson MM, Dong J, Hong WK, Spitz MR (2004).
Serum insulin growth factor (IGF) and IGF-binding protein levels predict risk
of second primary tumors in patients with head and neck cancer.
Clinical Cancer Research , 10:3988--3995.
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Do, K-A, Aitken J, Green A, Martin NG. Analysis of melanoma onset: assessing familial aggregation by using estimating equations and fitting variance components via Bayesian random effects models (2004). Twin Research, 7(1):98--113.
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Jonasch E, Do K-A , Logothetis C, McDonnell TJ (2004). Tissue array applications for target and drug discovery. In Molecular Cancer Therapeutics:
Strategies for Drug Discovery and Development, 28 pages. Edited by
Prendergast, Wiley.
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Pisters LL, Pettaway CA, Troncoso P, McDonnel TJ, Stephens LC, Wood CG,
Do K-A , Brisbay SM, Wang X, Hossan EA, Evans RB, Soto C, Fenstermacher MJ,
Parker K, Merritt JA, Steiner MS, Logothetis CJ (2004). Evidence that transfer of functional
p53 protein results in increased apoptosis in prostate cancer.
Clinical Cancer Research , 10:2587--2593.
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Leibovici D, Kamat AM, Do K-A , Pettaway CA, Ng CS, Evans RB, Rodri
guez-Bigas M, Skibber J, Wang X, Pisters LL (2004). Transrectal ultrasound ver
sus magnetic resonance imaging for detection of rectal wall invasion by prosta
te cancer. Online publication, The Prostate 9999:1-4.
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Do K-A , Broom BM, Wen S (2003). GeneClust. In The analysis of gene expression data: Methods and software, pp 342--361. Edited by Parmigiani G, Garrett ES,
Irizarry RA, Zeger SL. Springer, NY.
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Kuhnert P, Do K-A (2003). Fitting genetic models to twin data with binary and ordinal outcomes: a simulation study to compare structural equaiton modeling and Bayesian hierarchical models. Behavior Genetics, 33(4), 439-452.
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Do K-A et al. (2003). Second primary tumors in patients with upper aerodigetive tract cancers: Joint effects of smoking and alcohol.
Cancer Causes and Controls, 14, 131-138.
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Wierda WG, Johnson MM, Do K-A , Manshouri T, Day A, O'Brien S,
Giles FJ, Kantarjian H, Thomas D, Faderl S, Keating M, Albitar M (2003). Plasma
Interleukin-8 level predicts for survival in chronic lymphocytic leukemia.
British Journal of Haematology , 120(3), 452--456.
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Mintz P, Kim J, Do K-A , Troncoso P, Zinner RG, Hong WK, Logothetis C
J, Pasqualini R, Arap W. (2003) Fingerprinting the circulating repertoire of ant
ibodies from cancer patients. Nature Biotechnology , 21 (1):57--63.
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Soliman AS, Wang X-M, DiGiovanni J, Eissa S, Morad M, Vulimiri S, Mahgoub
KG, Johnston DA, Do K-A, Seifeldin IA, Boffetta P, Bondy ML. (2003) Serum
organochlorine levels and history of lactation in Egypt. Environmental Re
search , 92(2): 110-117.
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Do K-A (2002). Biostatistical approaches for modeling longitudinal a
nd event time data. Clinical Cancer Research, 8 (8): 2473--2474.
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Faderl S, Keating MJ, Do K-A , Liang S-Y, Kantarjian HM, O'Brien S,
Garcia-Manero G, Albitar M.(2002). Expression profile of 11 proteins and
their prognostic significance in patients with chronic lymphocytic leukemia
(CLL). Leukemia , 16 , 1045--1052.
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Sample D, Wargovich M, Fischer SM, Inamdar N, Schwartz P, Wang X, Do K-A , Sinicrope F (2002).
A dose-finding study of aspirin for chemopreventoin utilizing rectal mucosal
prostaglandin E(2) levels as a biomarker (2002). Cancer Epidemiology Biomarkers and Prevention , 11 , 275--279.
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Arap W, Kolonin MG, Trepel M, Lahdenranta J, Cardo-Vila M, Giordano RJ, Mi
ntz PJ, Ardelt PU, Yao VJ, Vidal CI, Chen L, Flamm A, Valtanen H, Weavind LM, Hi
cks ME, Pollock RE, Botz GH, Bucana CD, Koivunen E, Cahill D, Troncoso P, Bagger
ly KA, Pentz RD, Do K-A , Logothetis CJ, Pasqualini R (2002). Steps toward
mapping the human vasculature by phage
display (2002). Nature Medicine , 8 (2):121--127.
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Pu YS, Do K-A , Luo W, Logothetis C, Lin S-H. Enhanced suppression of
prostate tumor growth by CEACAM1 gene therapy plus angiogenesis inhibitor TNP-
470. Anti-Cancer Drug , 13 , 1--8.
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Sinicrope FA, Hart J, Stephens C, Frazier ML, Half E, Do K-A , Michel
assi F (2002). Spontaneous apoptotic rates and P53 expression in sporadic colon
carcinomas realtive to hereditary nonpolyposis colorectal cancers. Submitted to
International Journal of Cancer .
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Manshouri T, Do K-A , Johnson MM, Giles FJ, O'brien S, Cortes J, Thom
as D, Kantarjian HM, Keating M, Albitar M (2002). Soluble CD52 in the plasma of
patients with chronic lymphocytic leukemia and its influence on CAMPATH-1H therapy. Lancet . In press.
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Wayne JD, Lauwers GY, Ikai I, Doherty DA, Belghiti J, Yamaoka Y, Regimbea
u JM, Nagorney DM, Do K-A , Ellis LM, Curley SA, Pollock RE, Vauthey JN (2
002).
Preoperative predictors of survival after resection of small hepatocellular
carcinomas. Annals of Surgery , 235(5): 722--730.
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Vauthey J-N, Abdalla EK, Doherty DA, Gertsch P, Loyer EM, Fenstermacher MJ
, Lerut J, Materne R, Wang X, Encarnacion A, Herron D, Mathey C, Ferrari G,
Charnsangavej A, Do K-A , Denys A (2002). Body surface area and body weight
predict total liver volume in Western adults. Liver Transplantation,
8 (3): 233-240.
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Fizazi K, Prow DM, Do K-A , Wang X, Finn L, Kim J, Daliani D,
Papandreou CN, Tu S-M, Millikan RE, Pagliaro LC, Logothetis CJ, Amato RJ (2002)
. Alternating dose-dense chemotherapy in patients with poor diagnosis dissemina
ted non-seminomatous germ cell tumors. British Journal of Cancer , 86
(10):1555--1560.
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Fizazi K, Do K-A , Wang X, Finn L, Logothetis CJ, Amato RJ (2001).
A 20% dose reduction of the original CISCA/VB regimen allows better tolerance a
nd identical survival rate in good-risk and intermediate-risk disseminated testi
cular non-seminomatous germ-cell tumours: Final results of a Phase III
randomized trial. Annals of Oncology , 13 (1): 125-134.
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Moore RJ, Do K-A , Doherty DA, Chamberlain RM, Khuri FR (2001). Racia
l disparity in survival from squamous cell carcinoma of the oral cavity and phar
ynx.
Ethnicity and Health, 6(3): 165-177.
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Do K-A , Broom BM, X-M Wang (2001) Importance bootstrap resampling for proportional hazards regression. Communications in Statistics - Theory and Methods , 30(10):2173-2188.
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Faderl S, Kantarjian HM, Do K-A, Liang S-Y, O'Brien S, Manshouri T, Keatin
g M, Albitar M.(2002) Profiling of protein expression and its prognostic signif
icance in patients with chronic lymphocytic leukemia (CLL). Leukemia , in
press.
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Bilimoria MM, Lauwers GY, Doherty DA, Nagorney DM, Belghiti J,
Do K-A , Ikai I, Yamaoka Y, Vauthey J-N. (2001) Underlying disease, not
tumor factors, predicts long-term survival after hepatic resection of
hepatocellular carcinoma. Archives of Surgery , 136 (5):528-535.
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Chang DW, Langstein HN, Gupta A, De Monte F, Do K-A , Wang X, Robb G
(2001) Reconstructive management of cranial base defects following tumor ablatio
n, with Discussion. Plastic and Reconstructive Surgery , 107(6):1346-
1357.
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Do K-A , Wang X. Bayesian mixed effects models using BUGS to quantify
genetic variance components for normal quantitative traits and age at onset in
nuclear families (2000). Genetic Analysis Workshop 12, Volume 2: pp 117-12
1.
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Do K-A, Broom BM, Kuhnert P et al (2000) Genetic analysis
of the age-at-menopause by using estimating equations and Bayesian random effects models.
Statistics in Medicine, 19 : 1217-1235.
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Kuhnert P, Do K-A , McClure R. Visualising multivariate models with focus on MARS in an epidemiologica
l case-control study. Computational Statistics and Data Analysis ,
34:371-386.
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Vauthey JN, Chaoui A, Do K-A et al (2000) Standardized measurement of the future liver remnant prior to
extended liver resection: Methodology and clinical associations. Surgery , 127 :12-19.
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Treloar SA, Sadrzadeh S, Do K-A , Martin NG, Lambalk CB (2000)
Birth weight and age at menopause in Australian female twin pairs:
exploration of the fetal origin hypothesis. Human Reproduction ,
15 (1):55-59.
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Do K-A, Green A, Guthrie JR et al (2000) A longitudinal study
of risk factors for coronary heart disease across the menopausal transition.
American Journal of Epidemiology, 151 :584-593.
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Brandt ER, Hayman WA, Currie B, Carapetis J, Jackson DC, Do K-A, Good MF (1999).
Functional analysis of IgA antibodies
specific for a conserved epitope within the M protein of group A streptococci
from Australian Aboriginal endemic communities. Int Immunol: 569-576.
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Bellamy N, Klestov A, Muirden K, Kuhnert P, Do K-A , O'Gorman L, Martin N (1999).
Perceptual variation in categorising individual peripheral joints for the presence or absence of osteoarthritis
using a standard homunculus: observations based on an Australian Twin Registry Study of osteoarthritis.
Inflammopharmacology, 7 (1): 37-46.
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Bellamy N, Tessar P, Walker D, Klestov A, Muirden K, Kuhnert P, Do K-A , O'Gorman L,
Martin N (1999). Perceptual variation in grading hand, hip, and knee radiographs:
Observations based on an Australian Twin Registry study of osteoarthritis. Annals of Rheumatic Diseases ,
58 (12): 766-769.
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Pratiwi R, Fletcher LM, Do K-A et al (1999) Linkage disequilibrium
analysis in Australian hemochromatosis patients indicates a non-classical
pattern and bipartite association with clinical expression.
Journal of Hepatology:39-46.
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Hickey K, Do K-A, Green A (2000) Smoking and prostate cancer.
Epidemiologic Review, 23(1):115-125.
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Do K-A, Kirk K (1999) Discriminant analysis of event-related potential
curves using smoothed principal components. Biometrics, 55 :
292-301.
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Ryan PA, Do K-A , Kay BH (2000) Definition of Ross River Virus Vectors
at Maroochy Shire, Australia. J Medical Entomology , 37 :146-152.
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Ryan PA, Do K-A , Kay BH (1999) Spatial and temporal analysis of Ross River
Virus disease patterns at Maroochy Shire, Australia: Association between human
morbidity and mosquito (Diptera: Culicidae) abundance. J Medical Entomology ,
36 , 4:515-521.
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Treloar SA, Do K-A et al (1999). Predictors of hysterectomy in an
Australian twin study. Amer J Obst Gynae, 180 (4):945-954.
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Carlstein E, Do K-A, Hall P, Hesterberg T and Kunsch H (1998) Matched-block
bootstrap for dependent data. Bernouilli, 4 : 305-328.
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Brayne C, Do K-A et al (1998) Is health protective behaviour
in adolescents related to personality? A study of sun protective behaviour
and the Eysenck Personality Questionnaire (junior version) in Queensland.
Personality and Individual Differences, 25 : 889-895.
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Khan S, Do K-A et al (1998) Diagnostic value of P53
immunohistochemistry in Barrett's oesophagus: an endoscopic study.
Pathology, 30 : 136-140.
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Jass JR, Do K-A et al(1998) Morphology of sporadic RER-positive
colorectal cancer. GUT, 42 : 673-679.
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Wright K, Wilson PJ, Kerr J, Do K-A et al (1998) Frequent
loss of heterozygosity and three critical regions on the short arm of chromosome
8 in ovarian adenocarcinomas. Oncogene, 17 : 1185-1188.
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Treloar SA, Do K-A, Martin NG (1998) Genetic influences on the age
at menopause (Commentary) Lancet, 352 : 1084-1085.
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Do K-A, Treloar S et al (1998) Factors predictive of the
age at menopause in a large Australian twin study. Human Biology,
70 : 1073-1091.
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Do K-A (1998) Review of ``Modelling Longitudinal and Spatially Correlated
Data''. Edited by Gregoire, Brillinger, Diggle, Russek-Cohen, Warren, Wolfinger.
Aust J Stat: 249-250.
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Do K-A (1996) Review of ``Bayesian Data Analysis'' by Gelman A,
Carlin JB, Stern HS, Rubin DB. Aust J Stat, 38: 108-109.
-
Wood ATA, Do K-A and Broom BM (1996) Sequential linearization of
empirical likelihood constraints with application to U- statistics. Journal
of Computational and Graphical Statistics, 5 : 365-385.
-
Do K-A (1995). A numerical study of the matched-block bootstrap
for dependent data. (Proceedings of the 27th Symposium on the Interface
of Computing Science and Statistics, Pittsburgh, Pennsylvania, June 21-24,
1995: 425-429.
-
Do K-A (1994) Review of ``Efficient and adaptive estimation for
semiparametric models'' by Bickel PJ, Klaassen CAJ, Ritov Y, Wellner JA.
Biometrics: 50 : 1227.
-
Do K-A (1994) Review of ``Large sample methods in statistics: An
introduction with applications'' by Sen PK, Singer JM. Aust J Stat: 250-251.
-
Chen Z, Do K-A (1994). Bootstrap method with saddlepoint approximations
and importance resampling. Statistica Sinica, 4: 407-421.
-
Booth JG, Do K-A(1994) Simple and efficient methods for constructing
bootstrap confidence intervals . Computational Statistics, 8:
333-346.
-
Do K-A, Hall P(1992). Distribution estimation using concomitants
of order statistics, with application to Monte Carlo simulation for the
bootstrap. Journal of the Royal Statistical Society, Series B, 54: 1-14.
-
Chen Z, Do K-A (1992). Importance resampling for the smoothed bootstrap.
J. Statist. Comp. & Sim., 42. 107-124.
-
Tridgell A, Millar B, Do K-A (1992) Alternative pre-processing techniques
for discrete Hidden Markov model phoneme recognition. {Proceedings of
the 1992 International Conference on Speech Recognition, Alberta, Canada.
-
Do K-A, Kokic P (1992) Bootstrap confidence interval estimation
for model-based surveys. Proceedings of the 24th Symposium on the Interface
of Computing Science and Statistics, College Station, Texas, March 18-21,
1992: 511-515.
-
Do K-A, Hall P(1991). On importance sampling for the bootstrap.
Biometrika, 78: 161-167.
-
Do K-A(1991). A simulation study of balanced and antithetic bootstrap
resampling methods. J. Statist. Comp. & Sim., 40: 153-166.
-
Do K-A (1991) Quasi-random resampling for the bootstrap. Proceedings
of the 24th Symposium on the Interface of Computing Science and Statistics,
Seattle, Washington, April 21-24, 1991: 297-300.
-
Do K-A, Hall P(1991). Quasi-random resampling for the bootstrap.
Statistics and Computing, 1: 13-22.
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Powell BL, Craig JB, Kute TE, Lyerly ES, Gregory BW, Do K-A, Contento
MM, Capizzi RL (1990) Correlation of the proliferative index of residual
leukemia with outcome in patients treated with sequential high dose ara-C
and asparaginase. Leukemia, 4 : 316-320.
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Weber SF, Peacock JE, Do K-A, Cruz JM, Powell BL, Capizzi R (1990).
Interaction of granulocytopenia and construction activity as risk factors
in nosocomial invasive filamentous fungal disease in patients with hematologic
disorders: potential role of high-efficiency particulate air filtrating
during construction activity. Infection Control and Hospital Epidemiology,
11 : 235-242.
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Do K-A (1990) A sequential combination of truncated and censored
sampling with recapture debugging. Statistics Research Section Technical
Report CSTR-023-90, ANU.
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Do K-A (1990) On recapture debugging for estimation of population
size and confidence bounds. Statistics Research Section Technical Report
CSTR-012-90, ANU.
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Do K-A, Solomon HS (1986). A simulation study of Sylvester's problem
in three dimensions, Journal of Applied Probability, 23 : 509-513.
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Do K-A, McLachlan GJ (1984). Estimation of mixing proportions: a
case study, Journal of the Royal Statistical Society, Series C, 33 : 134-140.