Stastical Bioinformatics Lab

Software

• BayesMendel (co-author) -- a comprehensive environment for prediction of inherited cancer susceptibility (R package)


• SRMA -- Sequence Robust Multi-array Analysis for resequencing arrays (R package)


• FamSeq -- A C++ based software for variant calling in data generated from family-based sequencing studies


• DeMix -- Deconvolution for Mixed Cancer Genomes (R/C function)


• LFSPRO -- Personalized risk assessment for families with Li-Fraumeni Syndrome (R package)


• MuSE -- Mutation somatic evolution estimation for mutation calling in sequencing data of tumor-normal pair samples (C++)