Statistical Bioinformatics Lab

CliPP/CSR

Clonal structure identification through penalizing pairwise differences. Consensus Clustering for Subclonal structure Reconstruction.

DeMixT

Software package that performs deconvolution on transcriptome data from a mixture of two or three components

Famdenovo

Famdenovo is an algorithm that calculates the probability of a germline mutation to be de novo based on family history data

FamSeq

A C++ based software for variant calling in data generated from family-based sequencing studies

LFSPRO

Personalized risk assessment for families with Li-Fraumeni Syndrome (R package)

MuSE

Mutation somatic evolution estimation for mutation calling in sequencing data of tumor-normal pair samples (C++)

SRMA

Sequence Robust Multi-array Analysis for resequencing arrays (R package)

BayesMendel