Data • CliPP

CliPP Data

12/20/2023

Here we provide the downloadable links of subclonal reconstruction results by CliPP, on both TCGA and PCAWG datasets. We also provide the source of our in-house simulation data (CliPPSim4k), along with a comparison between CliPP and PhyloWGS.

Please refer to our paper for more detailed information about the data.

Data Type Description
  • PCAWG
    		•  2,2778 samples across 38 cancer types.
  • TCGA
    		•  7,708 samples across 32 cancer types.
  • Simulation (CliPPSim4k)
    		•  4,050 in-house simulation samples across different purity, read deapth, CNA rate, and true number of clusters.